Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------MHRLLSDRARGWRRALCGIVLG------LLAWSAHGVPAKAPQDLRIDGEVLPGRSIDLLEQALSRVKFNTDPQQLRRGLVENRLLARAVEDQLTAQSRADLDASVEIEAGNLLEQVYGRRYREDLGPYLRQPRALSAERLREVLAPRSRGLVENSLL-----LDETQRREAAGVELIGWQFPGQ---------PAQVLDLLS-LYEGDNVQGQVELQQGNLAYLARQ--VQTRIRRDYLWYRLARDGFGPAERQGVRTLVRDKLVRHRYLHQIGLYSDFHH-ESDALRELAGKVSDKDAEAYYR-RNLERYRNVAQVQAAHIRLADQASADKVYAELRGGLAFDEAVRRYSLADDRDRDPPGDLGLIRPQDGRLDLLRKTALIQKADTVSQPMRIDGA-FEIVRVRSREDRQLPLDDRSVRFEVNQAVAREQLAAQFETRLRNLLAGARVEGL |
| 4CP6 Chain:A ((13-417)) | TKVGSIIQQNNIKYKVLTVEGNIGTVQVGNGVTPVEFEAGQDGKPFTIPTKITVGDKVFTVTEV--ASQAFSYYPDETGRIVYYPSSITIPSSIKKIQKKGFHGSKA---KTIIFDKGSQLEKI--------------EDRAFDFSELEEIELPASLEYIGTSAFSFSQKLKKLTFSSSSKLELISHEAFANLSNLEKLTLPKSVKTLGSNLFRLTTSLKHVDVEEGNESFASVDGVLFSKDKTQLIYYPSQKNDESYKTPKETKELASYSFNKNSYLKKLELNEGLEKIGTFAF---ADAIKLEEISLPNSLETIERLAFYGNLELKELILPD--NVKNFGKHVMNGLP---KLKSLTIGNNINSLPSFFLS------GVLDSLKEIHIKNK----STEFSVKKDTFAI--------------PETVKFYVTSEHIKDVLKSNLSTSN-----DIIVEKV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CP6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -46948 for 2888 contacts (-16.3/contact) +
2D Compatibility (PS) -37291 + (NN) 7280 + (LL) 3752
1D Compatibility (HY) -16400 + (ID) 3150
Total energy: -92757.0 ( -32.12 by residue)
QMean score : 0.126
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