Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGERLMPLSLDLLRVFESAARQLSFTAAAEELGTTQPAVSQQIKRLEKELATPLFQRVHRGIVLTDAGQLLLRHVAAGLETIDAGIAALGARQRHEVLQVATDYAFAAYWLMPRLPRFHQAHPHLDVSLVTSERG---LAGQRGDIDVAILFGDGR-SKHGEAHRLFREEVFPVCSPRLVEGLQLPLAKAHLARLPMLHLKPAQHARWFDWPALFEALAIDRQPIPAVLSFDNYTLLIQAAIAGQGVAIGWRHLVDGLLEQGLLCRPIGESCLSRYGYYAVLPERKRRQRLVDGFVDWLQAELQAGGA |
2FYI Chain:A ((90-296)) | --------------------------------------------------------------------------------------------DTSGVLTIATTHTQARYSLPEVIKAFRELFPEVRLELIQGTPQEIATLLQNGEADIGIASERLSNDPQLVAFPWFRWHHSLLVPHDHPLTQISPLTLESIAKWPLITYRQG-ITGRSRIDDAFARKGLL---ADIVLSAQDSDVIKTYVALGLGIGLVAEQSSGEQ-EEENLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDI |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FYI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -157998 for 1580 contacts (-100.0/contact) +
2D Compatibility (PS) -21401 + (NN) -3490 + (LL) 8608
1D Compatibility (HY) -6000 + (ID) 1750
Total energy: -182031.0 ( -115.21 by residue)
QMean score : 0.344
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