Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTIGLGIATLLFS------ATALAAPKPCEELKAEIETKIQSAGVTSYTLEIVRNDEVSDPNMVVGSC------ENGTKKIIYQKNDD-
3FPR Chain:A ((7-91))
---GDLGGCPFLVAENKTGYPTIVACKQDCNGTTETAPNG--TRCFSIGDEGLRRMTANLPYDCPLGQCSNGDCIPKETYEVCYRRNWRD
General information:
TITO was launched using:
RESULT:
Template:
3FPR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1249 for 429 contacts (-2.9/contact) +
2D Compatibility (PS) -7865 + (NN) -1489 + (LL) 648
1D Compatibility (HY) -2000 + (ID) 600
Total energy: -12555.0 ( -29.27 by residue)
QMean score : 0.121
(partial model without unconserved sides chains):
PDB file :
Tito_3FPR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FPR-query.scw
PDB file :
Tito_Scwrl_3FPR.pdb
: