Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLVGRRAVRVLCYVPPMPRRLRHPLADLRLPRWVPCLALLALSGCSTVSYYGQLASGQFAL--LRAREPAAAVIADPQRDARLRERLAKAEKARQFASERLGLPDNRSYRLYADIGRPYVVWNVFATPELSLQPVTHCFPIAGCVAYRGYYSEAAARAEAARQRALGDDVYVGGVQAYSTLGWFDDPILSSMLRWDDERLATLIFHELAHQKFYLRDDTAFNESFATFVEQEGTRQWREYRGLPPADGREEKRREQFTALVLASRARLEALYAGPLDDAAKRAGKAAEFQ-RLRREYAALSQREWGGESPFKAWIDAPFNNAKL-LPFGLYDQWVAAFAVLFRQVGGNWPAFYARVRALGQLPLAERQAALQRLAAAAP |
| 3ASM Chain:A ((2-309)) | ------SNYVIQADQQLLDALRAHYEGALSDRLPAGALFAVKRPDVVITAYR---SGKVLFAGKAAEQEAAKWISGASASNETADHQPSALAAHQLGS-----------------------LSAIGSDEV------------GTGDYFGPIVVAAAYVDRPHIAKIAA------------LGVKDSKQLN---DEAIKRIAPAIMETVPHAVTVLD-NPQYNRWQRSGMPQTKMKALLHNRTLVKLVDAIAPAE---PEAIIIDEFLKRDSYFRYLSDEDRIIRERVHCLPKAESVHVSVAAASIIARYVFLEEMEQLSRAVGLLLPKGAGAIVDEAAARIIRARG------EEMLETCAKLHFANTKKALAIAKRR-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ASM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -76622 for 2467 contacts (-31.1/contact) +
2D Compatibility (PS) -31387 + (NN) 4110 + (LL) 4320
1D Compatibility (HY) -3200 + (ID) 2550
Total energy: -105329.0 ( -42.70 by residue)
QMean score : 0.228
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