Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSDPKTLTPEQRIKELEQQLELMSQKDQFFETVVDVLKNDYGVSVVKKRSGKSSRKVKSQD---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 1KNY Chain:A ((1-253)) | MNGPIIMTREERMKIVHEIKERILDKY----------GDDVKAIGVYGSLGRQTDGPYSDIEMMCVMSTEEAEFSHEWTTGEWKVEVNFYSEEILLDYASQVESDWPLTHGQFFSILPIYDSGGYLEKVYQTAKSVEAQTFHDAICALIVEELFEYAGKWRNIRVQGPTTFLPSLTVQVAMAGAMLIGLHHRICYTTSASVLTEAVKQSDLPSGYDHLCQFVMSGQLSDSEKLLESLENFWNGIQEWTERHGYIVDVSKRIPF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KNY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 26078 for 252 contacts (103.5/contact) +
2D Compatibility (PS) -5853 + (NN) -5885 + (LL) 1216
1D Compatibility (HY) -800 + (ID) 600
Total energy: 14156.0 ( 56.17 by residue)
QMean score : ?
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