Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVAITHTPKLKHLDKLLAHCHRRRYTAKSTIIYAGDRCETLFFIIKGSVTILIEDDDGREMIIGYLNSGDFFGELGLFEKEGSEQERSAWVRAKVECEVAEISYAKFRELSQQDSEILYTLGSQMADRLRKTTRKVGDLAFLDVTGRVARTLLDLCQQPDAMTHPDGMQIKITRQEIGRIVGCSREMVGRVLKSLEEQGLVHVKGKTMVVFGTR
4I01 Chain:A ((24-219))
------------LEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFE-EG--QERSAWVRAKTACEVAEISYKKFRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLDLTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLEDQNLISAHGKTIVVY---
General information:
TITO was launched using:
RESULT:
Template:
4I01.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -135449 for 1420 contacts (-95.4/contact) +
2D Compatibility (PS) -21008 + (NN) -4283 + (LL) 1224
1D Compatibility (HY) -24400 + (ID) 6550
Total energy: -190466.0 ( -134.13 by residue)
QMean score : 0.606
(partial model without unconserved sides chains):
PDB file :
Tito_4I01.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4I01-query.scw
PDB file :
Tito_Scwrl_4I01.pdb
: