Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTCAYRREIHHAHVAIRDWLAGDSRADALDALMARFAEDFSMVTPH--GVVLDKTALGELFRSKGGTRPGL-RIEIDGESLLASGVDGATLAYREIQSDA---------AGRSERLSTVVLHRDDEGRLYWRHLQETFCG
1SJW Chain:A ((4-117))
-----------QTEIVRRMVSAFNT-GRTDDVDEYIHPDYLNPATLEHGIHTGPKAFAQLVGWVRATFSEEARLEEVRIE---ERGPWVKAYLVLYGRHVGRLVGMPPTDRRFSGEQVHLMRIV-DGKIRDHRDWPDFQG
General information:
TITO was launched using:
RESULT:
Template:
1SJW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15353 for 689 contacts (-22.3/contact) +
2D Compatibility (PS) -10302 + (NN) -352 + (LL) 1712
1D Compatibility (HY) -800 + (ID) 550
Total energy: -25645.0 ( -37.22 by residue)
QMean score : 0.200
(partial model without unconserved sides chains):
PDB file :
Tito_1SJW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SJW-query.scw
PDB file :
Tito_Scwrl_1SJW.pdb
: