Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MEIACLDLEGVLVP-EIWIAFAEKTG-IDALKATTRDI----PDYDVLMKQRLRILDEHGLKLGDIQEVIATLKPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYYR-------VIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAVHTYEDLKREFLKASSRSLSL----- |
| 3P96 Chain:A ((9-404)) | PKVSVLITVTGVDQPGVTATLFEVLSRHGVELLNVEQVVIRHRLTLGVLVCCPADVADGPALRHDVEAAIRKVGLDVSIERSDDVPIIREPSTHTIFVLGRPITAAAFGAVAREVAALGVNIDLIRGVSDYPVIGLELRVSVPPGADEALRTALNRVSSEEHVDVAVEDYTLERRAKRLIVFDVDSTLVQGEVIEMLAAKAGAEGQVAAITDAAMRGELDFAQSLQQRVATLA--GLPATVIDEVAGQLELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDG-TLTGRVVGPIIDRAGKATALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAFNAK-PALREVADASLSHPYLDTVLFLLGVTRGEIEAADAID |
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General information:
TITO was launched using:
| RESULT:
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Template: 3P96.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -122369 for 1712 contacts (-71.5/contact) +
2D Compatibility (PS) -21883 + (NN) -11197 + (LL) 176
1D Compatibility (HY) -6400 + (ID) 2650
Total energy: -164323.0 ( -95.98 by residue)
QMean score : 0.504
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