Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPHLVIEATANLRLETSPGELLEQANAALFASGQFGEADIKSRFVTLEAYRQGTAAVERAYLHACLSILDGRDAATRQALGESLCEVLAGAVAGGGEEGVQVSVEVREMERASYAKRVVARQR
2WKB Chain:A ((1-112))
-PCCELITNISIPD-DKAQNTLSEIEDAISNILGKPVAYIMSNYDYQKNLRFSGS--NEGYCFVRLTSI-----SNNSLLADKITKILSNHLSV---KPRRVYIEFRD----NFAFSGSLFGG
General information:
TITO was launched using:
RESULT:
Template:
2WKB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52576 for 694 contacts (-75.8/contact) +
2D Compatibility (PS) -11060 + (NN) -2557 + (LL) 884
1D Compatibility (HY) -3200 + (ID) 750
Total energy: -69259.0 ( -99.80 by residue)
QMean score : 0.482
(partial model without unconserved sides chains):
PDB file :
Tito_2WKB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WKB-query.scw
PDB file :
Tito_Scwrl_2WKB.pdb
: