Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNFALIG-AAGYIAPRHMRAIKDTGNCLVSAYDINDSVGIIDSISPQSEFFTEFEFFLDHASNLKRDSATALDYVSICSPNYLHYPHIAAGLRLGCDVICEKPLVPTPEMLDQLAVIERETDKRLYNILQLRHHQAIIALKDKVAREKSPHKYEVDLTYITSRGNWYLKSWKGDPRKSFGVATNIGVHFYDMLHFIFGKLQR-NVVHFTSEYKAAGYLEYEQARV-RWFLSVDANDLPESVKGKKPTYRSITVNGEEMEFSEGFTDLHTTSYEEILAGRGYGIDDARHCVETVNTIRSAVIVPASDNEGHPFVAALAR |
| 3OA2 Chain:A ((3-314)) | MKNFALIGAAG-YIAPRHMRAIKDTGNCLVSAYDINDSVGIIDSISPQSEFFTEFEFFLDHASNLKRDSATALDYVSICSPNYLHYPHIAAGLRLGCDVICEKPLVPTPEMLDQLAVIERETDKRLYNILQLRHHQAIIALKDKVARE-SPHKYEVDLTYITSRGNWYLKSWKGDPRKSFGVATNIGVHFYDMLHFIFGKLQRNVVHF-TSEYKTAGYLEYEQARVRWFLSVDAND-LPESVKGKKPTYRSITVNGEEMEF-----DLHTTSYEEILAGRGYGIDDARHCVETVNTIRSAVIVPASDNEGHPFVA---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OA2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -192795 for 2475 contacts (-77.9/contact) +
2D Compatibility (PS) -32185 + (NN) -9975 + (LL) 600
1D Compatibility (HY) -41200 + (ID) 14450
Total energy: -290005.0 ( -117.17 by residue)
QMean score : 0.528
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