Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMATQGVFTLPANTRFGVTAFANSSGTQTVNVLVNNETAATFSGQSTNNAVIGTQVLNSGSSGKVQVQVSVNGRPSDLVSAQVILTNELNFALVGSEDGTDNDYNDAVVVINWPLG
2JDM Chain:C ((2-115))-ATQGVFTLPANTRFGVTAFANASGTQTVNVLVNNETAATFSGQSTNNAVIGTQVLNSGSSGKVQVQVSVNGRPSDLVSAQVILTNELNFALVGSEDGTDNDYNDAVVVINWPLG


General information:
TITO was launched using:
RESULT:

Template: 2JDM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44201 for 831 contacts (-53.2/contact) +
2D Compatibility (PS) -13118 + (NN) -12052 + (LL) 208
1D Compatibility (HY) -14000 + (ID) 5650
Total energy: -88813.0 ( -106.87 by residue)
QMean score : 0.734

(partial model without unconserved sides chains):
PDB file : Tito_2JDM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2JDM-query.scw
PDB file : Tito_Scwrl_2JDM.pdb: