Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRVAPRDSAAQAASAVAESVRYQGRKASRQGSEQRRQAILDAAMRLIVRDGVRAVRHRAVAAEAQVPLSATTYYFKDIDDLITDTFALFVERNAEALSAFWSSVEGDLQEMAAVLADDPGARGSLVERIVELAVQYVQVQLTERREHLLAEQAFRQEALLNPRLRELADAHQRILSLGAVHFFQVLGSGQPEQDAKVLTSIILQMEYQGLVDGVEQLAVDEMRAILRRYLNLVMGL
2DG8 Chain:A ((7-164))
--------------------------------DPQRRERILAATLDLIAEEGIARVSHRRIAQRAGVPLGSMTYHFTGIEQLLREAFGRFTDHIVAVFDEHLGA---------------AADRDEAREAVA----DLVHELSEDSQRDLVLTQELYTLAARQPAYRELTHEWMRRSRVHLEKHFDP-------GTARQLDALIEGLTLHRALAREP---------------------
General information:
TITO was launched using:
RESULT:
Template:
2DG8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81623 for 1113 contacts (-73.3/contact) +
2D Compatibility (PS) -17546 + (NN) -11616 + (LL) 6624
1D Compatibility (HY) -5600 + (ID) 1950
Total energy: -111711.0 ( -100.37 by residue)
QMean score : 0.612
(partial model without unconserved sides chains):
PDB file :
Tito_2DG8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DG8-query.scw
PDB file :
Tito_Scwrl_2DG8.pdb
: