Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRNRVRELRAERGWSQAELAGKLEVSRQTVNAIETGRYDPSLPLAFKLARVFGLAIEAIFDDREGQLD
3VK0 Chain:A ((23-87))
-AYNMRLFRVNKGWSQEELARQCGLDRTYVSAVERKRWNIALSNIEKMAAALGVAAYQLLLPPQER--
General information:
TITO was launched using:
RESULT:
Template:
3VK0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31773 for 423 contacts (-75.1/contact) +
2D Compatibility (PS) -7155 + (NN) -4413 + (LL) 308
1D Compatibility (HY) -4400 + (ID) 950
Total energy: -48383.0 ( -114.38 by residue)
QMean score : 0.728
(partial model without unconserved sides chains):
PDB file :
Tito_3VK0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3VK0-query.scw
PDB file :
Tito_Scwrl_3VK0.pdb
: