Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSLSRRIPAALSPFQNRVIGACLLGGLLAAGAPAQAEEATGNARWVSDSLTTFVRSGPTDGYRIVGTLTSGQKVELLGTQGNYSQVRGENGSTVWIPSRDLQEVPGQAERLPQLEQKVAALTAELDGINDTWKTRVQGMQETLDTRKKLIDELQAARSNLDAELGKARSDLRAVQAQLGDENKQVLMRYMVYGGSIAGAGLFAGLILPSLLRVRRKRNDKWF |
2JEE Chain:A ((3-80)) | --------------------------------------------------------------------------------------------------MSLEVFEKLEAKVQQAIDTITLLQMEIEELKEKNNSLSQEVQNAQHQREELERENNHLKEQQNGWQERLQALLGRMEE---------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JEE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 10178 for 315 contacts (32.3/contact) +
2D Compatibility (PS) -8606 + (NN) -2372 + (LL) 8056
1D Compatibility (HY) -1200 + (ID) 500
Total energy: 5556.0 ( 17.64 by residue)
QMean score : 0.479
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