Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MNNSNLAAARNLIQVVTGEWKSRCVYVATRLGLADLIESGID--SDETLAAAVG---SDAERIHRLMRLLVAFEIFQGDTRD--GYANTPTSHLL-RDVEGSFRDMVLFYG-EEFHAAWTPACEALLSGTP-GFELAFGEDFYSYLKRCPDAGRRFLLAMKASNLAFHEIPR--LLDFRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDREGSLGVARDNLSSLLAGERVSLVGGDMLQEVPSNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDG---RVVVIERTISA---SEPSPMSVLWDVHLFMACAGRHRTTEEVVDLLGRGGFAVERIVDLPMETRMIVAARA |
| 1FP2 Chain:A ((8-352)) | RKPSEIFKAQALLYKHIYAFIDSMSLKWAVEMNIPNIIQNHGKPISLSNLVSILQVPSSKIGNVRRLMRYLAHNGFFEIITKEEESYALTVASELLVRGSDLCLAPMVECVLDPTLSGSYHELKKWIYEEDLTLFGVTLGSGFWDFLDKNPEYNTSFNDAMASDSKLINLALRDCDFVFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSGS-------NNLTYVGGDMFTSIPN-ADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMACLNGKERNEEEWKKLFIEAGFQHYKISPLTGFLSLIEIYP- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FP2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -181043 for 2380 contacts (-76.1/contact) +
2D Compatibility (PS) -35406 + (NN) -15996 + (LL) 508
1D Compatibility (HY) -22400 + (ID) 4000
Total energy: -258337.0 ( -108.54 by residue)
QMean score : 0.437
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