Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNGLPMNLIWFRCDLRTTDNSALLAA-ADGRPCLALYLLSPAQWREHDDAPCKVDFWLRNLGELQRQLAALNIPLLVRDCGHWRQAPEVIGRLCRELGVGAVHVNQEYGVNEERRDQAVGQRLREQGVAFHSHLDQLFFAPGSVLTRTGGYFQVFSQFRKVCHERLYQALPGVRPRPQPQPPHALASDPLPDAVPAFPRPADSLRRLWPAGEEVAQERLRDFADQHLADYHERRDFPALPGTSQLSPYLAAGVLSPRQCLDAALVANRGEFSGGQQGAATWINELLWREFYKHILVGYPRVSRHRPFREETEALRWRQAPAELEAWQQGRTGIPIIDAAMRQLLATGWMHNRLRMVVAMFLSKNLLIDWREGERWFMRHLIDGDLAANNGGWQWSASTGTDAVPYFRLFNPLSQSERFDPRGEFIRHWLPELAGLERKAIHDPSSLGLFAGVDYPRPMVDLKASRERALAAFRNLPPRDGRA |
| 2J07 Chain:A ((2-418)) | ----GPLLVWHRGDLRLHDHPALLEALA-RGPVVGLVVLDPNN---LKTTPRRRAWFLENVRALREAYRARGGALWVLEGLPWEKVPEA----ARRLKAKAVYALTSHTPYGRYRDGRVREAL---PVPLHLLPAPHLLPPD-----LPRAYRVYTPFSRLYRGAAPP---LPPPEALPK---GP---EEGEIPREDP-----GLPLPEPGEEAALAGLRAFLEAKLPRYAEERDRLDGEGGSRLSPYFALGVLSPRLAAWEAER-------RGGEGARKWVAELLWRDFSYHLLYHFPWMAE-RPLDPRFQAFPWQEDEALFQAWYEGKTGVPLVDAAMRELHATGFLSNRARMNAAQFAVKHLLLPWKRCEEAFRHLLLDGDRAVNLQGWQWAGGLGVDAAPYFRVFNPVLQGERHDPEGRWLKRWAPEYPSY-----------------APKDPVVDLEEARRRYLRLARDLA------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2J07.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -195170 for 3611 contacts (-54.0/contact) +
2D Compatibility (PS) -45229 + (NN) -20012 + (LL) 2588
1D Compatibility (HY) -18800 + (ID) 7600
Total energy: -284223.0 ( -78.71 by residue)
QMean score : 0.482
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