Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPKGLKRAVSALLITFLVYCLLGFLLIPGIGLRVANQQLAQYATVPARLERIEFNPFSLELTLWGLRLGEEKNPQLAFRRLYANLQLDSLWKRQLHLADVELEGPHTELLFGEKGQLNLASLFRIPPSESPEPEQPSDPFPLRIDRIQLAEGSLHFQDLRPSEPVDFSFDPLGFELHNLSTLPDDGAKMTLVATGPNGGRLDWEGDLTLVPITSRGHLSVKDIQLKAWWPYVRDNAPLVLENGVVSLSSDYRLDLSKDTQLLLDKAALKLADFSINSPQGKPLAKLASLDVAATTLDLAKQEVVLGEVRSQGLEAWAAREKDGQLDWQKLFADFTPPPRKAPAPKPAENTDPAAAPTDAAKTTSEPATDGAAKAAAIASGEASKDRPAEKDASVAETERATDDKESAKAAEGAADKVAKQETSKAPKTGKATGQETAKTAEIDKAASDSPQQLADTAKTPPPESTKASAETPAKPWNIVLRDAQLRGYKAHLVDRQPATEVPLEVGPLDLDLQNVDSLGKTPFDLKLKTGLGNRGQVQASGQVVLDPVSARLKVSTRDIDLRVAQAYISPFIRLELRSGFLGSELAVDLKSVEPLAFSVDGSAEVSQLHTLDTIKDRDFVKWTKLTLNGLAYRHEDSLSIQSVSFEEPYARFIINEDRSTNVSELIIPQPASSSGKTAAESKNAPASKPLGIHIGGVRINNGSANFADLTLMPPFGTAIQQLSGEVGTLDTRNSQPAKVDIKGKVDKYAPVTIAGELDPFDPLKKLDITTSFKRVELTTLTPYSGKFAGYRIRKGRLNLDLHYQIERSQLKAENKVLL---------EGLQLGEKVDSPDAVDLPV--KLAVALLKDTKGNIDIQLPVAGDLNNPEFSVMPIVWQTLRNLVLRAVQAPFKFIAGLAAGGNEDLGTVPFAAGSDELTPEAQANLDKLADALKERPALRLEVEGVASAAADGPSIGAKRLELEYQNTYYRMLQRRGDKVPSDAKQLEVPENMQAPLLEGIYRTRLKQQPPAEWKELDSDERTAKMREAVIASWAKSQVLLRQIGQARATRIKDYLVEKGQLPDDRIYLIDVSFAEGEDKGNVDTQLHLDSE |
2ZF8 Chain:A ((1-271)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VMGKRYVATPQQSQWEMVVNTPLECQLVHPIPSFGDAVFSSRANKKINLDFELKMRRPMGETRNVSLISMPPPWRPGEHADRITNLKFFKQFDGYVGGQTAWGILSELEKGRYPTFSYQDWQSRDQRIEVALSSVLFQNKYNAFSDCISNLLK--YSFEDIAFTILHYERQGDQLTKASKKRLSQIADYIRHNQDIDLVLVATYS--------ASQSLSERRAESLRDYFQSLG----LPEDRIQVQGYGRVVISLGRTQ----------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZF8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -19727 for 1661 contacts (-11.9/contact) +
2D Compatibility (PS) -24887 + (NN) -11723 + (LL) 50576
1D Compatibility (HY) -3200 + (ID) 1450
Total energy: -10411.0 ( -6.27 by residue)
QMean score : 0.307
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