Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNPQYPTRLPCGSRVLDL-ARPHVMGILNVTPDSFSDGGRYDRLDDALRHAERMVLEGATLIDVGGESTRPGARSVSPTEELERVAPVVERIARELDVVISVDTSTPAVMRETARLGAGLINDVRSLQRDGAL-DAAVDSGLAVCLMHMRGEPQTMQDAPAYQDVVAEVGAFLQERVDACVAAGIDRERLLLDPGFGFAKTLEHNLVLFRHLQALHGLGLPLLVGVSRKSMIGKVLGREVDERLYGSLALAALALAKGARIIRVHDVAATVDVMRMISAVEMAD |
| 3TYD Chain:B ((22-291)) | ----KWDYDLRCGEYTLNLNEKTLIMGILNVTPD----GGSYNEVDAAVRHAKEMRDEGAHIIDIGGEST-------SVEEEIKRVVPMIQAVSKEVKLPISIDTYKAEVAKQAIEAGAHIINDIWGAKAEPKIAEVAAHYDVPIILMHNR-------DNMNYRNLMADMIADLYDSIKIAKDAGVRDENIILDPGIGFAKTPEQNLEAMRNLEQLNVLGYPVLLGTSRKSFIGHVLDLPVEERLEGTGATVCLGIEKGCEFVRVHDVKEMSRMAKMMDAM---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TYD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -208982 for 2212 contacts (-94.5/contact) +
2D Compatibility (PS) -28585 + (NN) -19629 + (LL) 828
1D Compatibility (HY) -20800 + (ID) 5350
Total energy: -282518.0 ( -127.72 by residue)
QMean score : 0.587
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