Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQQIQRDIAQALQVQPPFQSEADVQAQIARRIAFIQQCLKDS-GLKTLVLGISGGVDSLTAGLLAQRAVEQLREQTGDQAYRFIAVRLPYQVQQDEADAQASLAT-IRADEEQTVNIGPSVKALAEQLEALEGLEPAKSDFVIGNIKARIRMVAQYAIAGARGGLVIGTDHAAEAVMGFFTKFGDGACDLAPLSGLAKHQVRALARALGAPENLVEKIPTADLEDLRPGHPDEASHGVTYAEIDAFLHGQPLREEAARVIVDTYHKTQHKRELPKAP |
1WXI Chain:A ((2-268)) | --TLQQQIIKALGAKPQI----NAEEEIRRSVDFLKSYLQTYPFIKSLVLGISGGQDSTLAGKLCQMAINELRLETGNESLQFIAVRLPYGVQADEQDCQDAIAFIQ-PDRVLTVNIKGAVLASEQALREA---GIELSDFVRGNEKARERMKAQYSIAGMTSGVVVGTDHAAEAITGFFTKYGDGGTDINPLYRLNKRQGKQLLAALACPEHLYKKA-------------DEVALGVTYDNIDDYLEGKNVPQQVARTIENWYLKTEHKRRPPITV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WXI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -114687 for 1946 contacts (-58.9/contact) +
2D Compatibility (PS) -28058 + (NN) -19277 + (LL) 928
1D Compatibility (HY) -15200 + (ID) 6000
Total energy: -182294.0 ( -93.68 by residue)
QMean score : 0.646
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