Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRPLVATVDLSAIRHNYALAKRCAPQRQAFAVVKANAYGHGAREVV-TALHDDADGFAVACLEEAAEVRALHASARIL--LLEGCFEASEYALAG-QLRLDLVIQGAEQGEAFLAAGLDIPLNVWLKLDSGMHRLGFDPAALRAWHARLR---SHPGVRELNLISHFACADERNHPLTEQQLESFLGLL------DLDFDQRSLANSAAVLTIPAAHMDWLRPGIMLYGSTPLADLSAAELGLKPAMSLGAQLISLREVAVGESVGYGATWIAERPARIGTVSCGYADGYPRTAPAGTPVLVGGRRAILAGRVSMDMLAVDLSDLP-EARVGDPVELWGAGLSVDEVARA----CGTLGYELLSKVTARVPRRYSH |
| 1XFC Chain:B ((14-378)) | -----AMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTALGAGAAELGVATVDEALALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDELLHAVRRTGRTA--TVTVKVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADKPDDSINDVQAQRFTAFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSPVPAL--GDMGLVPAMTVKCAVALVKSIR---------------DTNLALLPIGYADGVFRSLGGRLEVLINGRRCPGVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWADLVGTIHYEVVTSPRGRITRTY-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1XFC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -181945 for 2787 contacts (-65.3/contact) +
2D Compatibility (PS) -35321 + (NN) -9762 + (LL) 1644
1D Compatibility (HY) -21200 + (ID) 5700
Total energy: -252284.0 ( -90.52 by residue)
QMean score : 0.441
|
|
|