Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIRDTLHDLHRPLGDTGLAVSPLGLGTVKFGRDQGVKYPSGFTIPDDREAADLLALARDLGINLIDTAPAYGR---------SEERLGPLLR--GQREHWVIVSKVGEEFVDG----QSVFDFSAAHTRRSVERSLKRLETDRIELVLVHSDGNDLD--------------ILENSEVYPTLAALKREGLIGAYGLSGKTVEGGLRALR--------EGDCAMVTYNLNERA-ERPVIEYAAAHAKGILVKKALASGHACLG---------------------------------------AGQDPVRASFELVFDQPGVAAAIVGTINPLHLAHNVAMAAQALKKA |
| 1LQA Chain:A ((1-329)) | ------MQY-HRIPHSSLEVSTLGLGTMTFGEQ-----------NSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTETYVGNWLAKHGSREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAGKIRYIGVSNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCLGFGTLTGKYLNGAKPAGARNTLFSRFTRYSGEQTQKAVAAYVDIARRHGLDPAQMALAFVRRQPFVASTLLGATTMDQLKTNIESLHLELSED |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1LQA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -103688 for 2117 contacts (-49.0/contact) +
2D Compatibility (PS) -26636 + (NN) -6481 + (LL) 1052
1D Compatibility (HY) -11600 + (ID) 3650
Total energy: -151003.0 ( -71.33 by residue)
QMean score : 0.500
|
|
|