Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSRVTLSRYLIEQTRSHNTPADLRFLIEVVARACKEISHAVSKGALGGVLGSMGTENVQGEVQKKLDVMSNEILLEANEWAGNLAGMASEEMDHPYQIPGRYPKGAYLLVFDPLDGSSNIDVNVSVGTIFSVLRCPNEYLNQNDTLREEAFLQPGTTQVAAGYAIYGPQTMLMLTLGNGVKGFTLDRELGSFVLTHDNISVPESTAEFAINMSNQRHWEAPVKRYVEELLAGKEGPLGKNYNMRWIASMVADVHRILTRGGVFMYPRDAREPEKPGKLRLMYEANPMSFIIEQAGGAATNGTQRILDIKPENLHQRVAVFLGSKQEVERITGYHAE |
| 3IFA Chain:D ((11-325)) | ---LTLTRYVMEKGRQAKGTGELTQLLNSMLTAIKAISSAVRKAGLAHLYGIAGSVNV----VKKLDVLSNSLVINMLQSSYSTCVLVSEE-NKDAIITAKEKRGKYVVCFDPLDGSSNIDCLASIGTIFAIYRKTSE-------PSEKDALQCGRNIVAAGYALYGSATLVALSTGQGVDLFMLDPALGEFVLVEKDVKIKKKGKIYSLNEGYAKYFDAATTEYVQKKKFPEDG--SAPYGARYVGSMVADVHRTLVYGGIFLYPANQKSPK--GKLRLLYECNPVAYIIEQAGGLATTGTQPVLDVKPEAIHQRVPLILGSPEDVQ-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IFA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -174199 for 2643 contacts (-65.9/contact) +
2D Compatibility (PS) -33716 + (NN) -20498 + (LL) 1464
1D Compatibility (HY) -27200 + (ID) 6600
Total energy: -260749.0 ( -98.66 by residue)
QMean score : 0.529
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