Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPPVVIYTTAWCPYCIRAKQLLQRKGVDFQEIACDGKP----ELRAELARKAGSTTVPQIWIGETHVGGCDDLHALERAGKLDALLSA
3RHB Chain:A ((19-104))
-NTVVIYSKTWCSYCTEVKTLFKRLGVQPLVVELDQLGPQGPQLQKVLERLTGQHTVPNVFVCGKHIGGCTDTVKLNRKGDLELMLA-
General information:
TITO was launched using:
RESULT:
Template:
3RHB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61313 for 583 contacts (-105.2/contact) +
2D Compatibility (PS) -9275 + (NN) -7609 + (LL) 352
1D Compatibility (HY) -8800 + (ID) 1550
Total energy: -88195.0 ( -151.28 by residue)
QMean score : 0.753
(partial model without unconserved sides chains):
PDB file :
Tito_3RHB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RHB-query.scw
PDB file :
Tito_Scwrl_3RHB.pdb
: