Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAFPAGFGWAAATAAYQVEGGWDADGKGPCVWDTFTH-QGGERV-FKNQTGDVACGSYTLWEEDLKCIKQLGLTHYRFSLSWSRLLPDGT-TGFINQKGIDYYNKIIDDLLKNGVTPIVTLYHFDLPQTLED-QGGWLSEAIIESFDKYAQFCFSTFGDRVKQWITINEANVLSVMSYDLGMFPPGIPHF-----------GTGGYQAAHNLIKAHARSWHSYDSLFRKKQKGMVSLSLFAVWLEPADPNSVSDQEA-AKRAITFHLDLFAKPIFIDGDYPEVVKSQIASMSQKQGYPSSRLPEFTEEEKKMIKGTADFFAVQYYTTRLIKYQENKKGELGILQ--DAEIEFF---PD--PSWK--------NVDWIYVVPWGVCKLLKYIKDTYNNPVIYITENGFPQSDP----APLDDTQRWEYFRQTFQELFKAIQLD-KVNLQVYCAWSLLDNFEWNQGYSSRFGLFHVDFEDPARP-RVPYTSAKEYAKIIRNNGLEAHL |
| 1E4M Chain:M ((24-501)) | -SFSSDFIFGVASSAYQIEGTI---GRGLNIWDGFTHRYPN-KSGPDHGNGDTTCDSFSYWQKDIDVLDELNATGYRFSIAWSRIIPRGKRSRGVNEKGIDYYHGLISGLIKKGITPFVTLFHWDLPQTLQDEYEGFLDPQIIDDFKDYADLCFEEFGDSVKYWLTINQLYSVPTRGYGSALDAPGRCSPTVDPSCYAGNSSTEPYIVAHHQLLAHAKVVDLYRKNY-THQGGKIGPTMITRWFLPYN-DTDRHSIAATERMKEFFLGWFMGPLT-NGTYPQIMIDTVG----------ERLPSFSPEESNLVKGSYDFLGLNYYFTQYAQPSPNPVNSTNHTAMMDAGAKLTYINASGHYIGPLFEKDKADSTDNIYYYPKGIYSVMDYFKNKYYNPLIYVTENGISTPGDENRNQSMLDYTRIDYLCSHLCFLNKVIK-EKDVNVKGYLAWALGDNYEFNKGFTVRFGLSYIDWNN--VTDRDLKKSGQWYQSFISP------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1E4M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -268586 for 3929 contacts (-68.4/contact) +
2D Compatibility (PS) -47196 + (NN) -17992 + (LL) 1248
1D Compatibility (HY) -34800 + (ID) 7800
Total energy: -375126.0 ( -95.48 by residue)
QMean score : 0.508
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