Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------MQGLNHTSVSEFILVGFSAFPHLQL--------MLFLLFLLMYLFTLLGNLLIMATVWSERSLHMPMYLFLCALSITEILYTVAIIPRMLADLLSTQRSIAFLACASQMFFS-FSFGFTHSF-----LLTVM----GYDRYVAICHPLRYNVLMSLR---GCTCRVGCSWAGGLVMGMVVTSAIFHLAFCGHKEIHHFFCHVPPLLKLACGDDVLVVAKGVGLVCITALLGCFLLILLSYAFIVAAILKIP-SAEGRNKAFSTCASHLTVVVVHYGFASVIYLKPKGPQS-------PEGDTLMGITYTVLTPFLSPI----IFSLRNKELKVAMK-----KTCFTKLFPQNC |
| 4NWV Chain:A ((30-384)) | SVAPVAKANALRTTSSNSILLKGCDRIVTVVDASTYDAGSAIVSIPITPDIAYRLGSTARTFQRIKYRSLKFRVNAQ-CATT-TAGGYVAGFVKDAADVLPTGTASIPYLMSNTGSFTQPWWKSTVHNVKIPQKLFYTEAPTRGADAVREYC-PGQFHVLVDSKPSQICPVTVDLEWVVELH-DATFRKESDQTAISAIVADHTLNVYGLPATSNRVGHILISPIGQTPKDLTPTRFATFFGFLPDDKFCVRIPTPVDVVLTGDNVYQSVEATHIRAYLVNGGLGIDFHLAAYNDTTHTIQPIIPTLWNVYDVTGAVTAPFTSAIYDNHVWTHKDKFVPVSFQDEPIPGTVFDYLYPRS- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NWV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -332920 for 2164 contacts (-153.8/contact) +
2D Compatibility (PS) -32167 + (NN) 10702 + (LL) 688
1D Compatibility (HY) -3200 + (ID) 3000
Total energy: -359897.0 ( -166.31 by residue)
QMean score : 0.079
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