Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVNLTSMSGFLLM-GFSD-ERKLQILHALVFLVTYLLALTGNLLIITIITVD-RRLHSPMYYFLKHL-SLLDLCFISVTVPQSIANSLMGNGYISLVQCILQVFFFIALASSEVAILTVMSYDRYAAICQPLHYETIMDPRACRHAVIAVWIAGG-LSGLMHAAINFSIPLCGKRVIHQFFCDVPQMLKLACSYEFINEIALAAFTTSAAFICLISIVLSYIRIFSTVLRIPSAEGRTKVFSTCLPHLFVATFFLSAAGFEFLRLPSDSSSTVDLVFSVFYTVIPPTLNPVIYSLRNDSMKAALRKMLSK-EELPQRKMC-LKAMFKL---- |
| 4G3A Chain:A ((5-231)) | --KPSDLDGFIQQMPKADMRVKVQLAEDLVTFLSDD--------TNSIVCTDMG-------FLIDGLMPWLT------------------GSHFKIAQKSLEAFSELIKRLG-------SDFNAYTATVLPHVIDRLGDSRDTVREKAQLLLRDLMEHRVLP----------PQALIDKLATSCFKHKNAKVREEFLQTIVNALHEYGTQQLS----VRVYIPPVCALLGDPTVNVREAAIQTLVEIYKHV-------------------------------------------------GDRLRPDLRRMDDVPASKLAMLEQKFDQVKLE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4G3A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -232568 for 1632 contacts (-142.5/contact) +
2D Compatibility (PS) -22415 + (NN) -5028 + (LL) 8376
1D Compatibility (HY) -4000 + (ID) 1900
Total energy: -257535.0 ( -157.80 by residue)
QMean score : 0.333
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