Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSSCNFTHATFVLIGIPGLEKAHFWVGFPLLSMYVVAMFGNCIVVFIVRTERSLHAPMYLFLCMLAAIDLALSTSTMPKILAL-FWFDSREISFEACLTQMFFIHALSAIESTILLAMAFDRYVAICHPLRHAAVLNNTVTAQIGIVAVVRGSLFFFPLPLLIKRLAFCHSNVLSHSYCVHQ-DVMKLAYADT-----LP-------NVVYGLTAILLVMGVDVMFISLSYFLIIRTVLQLPSKSERAKAFGTCVSHIGVVLA-------------FYVPLIGLSVVHRFGNSL-HPIVR-------VVMGDIYLLLPPVINPIIYGAKTKQIR----TRVLAMFKISCDKDLQAVGGK |
| 4BZF Chain:A ((1-322)) | ----ANFIEKITYLGTPAIKA-----GNEHLEMIVVPEWGSNVISLVDKTTN---------VQLLREPETAESFHDTPTLYGIPILFPPNRIS-DGTFSFRGRTYHFDINEK--------DKHNHLHGFLYHEK-WNVVTTKQTDEGVIVETEIDLSELPHVQKQ--FPHHAVVRMTYTIKENTLFKHATVMNKGKEAFPWGIGYHTTFIFPAESSLFSLTADQQWELDERLLPTGKLMDVPYKEALHEGMDLRHKQLDDVFLSSYQKRGGENQAVIYHQHAHISIIYKADEQFKHWVVYNADGKQGYLCPEPYTWVTNAVNLDLPSSLTGLQVLEPGEETTAKSSITIELN------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BZF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -279751 for 2183 contacts (-128.1/contact) +
2D Compatibility (PS) -29673 + (NN) 7430 + (LL) 3912
1D Compatibility (HY) -5600 + (ID) 2450
Total energy: -306132.0 ( -140.23 by residue)
QMean score : 0.160
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