Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------MLGLNGTPFQPATLQLTGIPGIQTGLTWVALIFCIL-----YMISIVGNLSILTLVFWEPALHQPMYYFLSMLALNDLGVSFS--TLPTVISTFCFNYNHVAFNACLVQMFFIHTFSFMESGILL-------------AMSLDRFVAICYPLRYVTVLTHNRIL---AMGLGILTKSFTTLFPFPFVVKRLPFCKGNVLHHSYCLHPDLMKVACGDIHVNNIYGLLVIIFTYGMDSTFILLSYALILRAMLVIISQEQRLKALNTCMSHICAVLAFYVPIIAVSMIHRFWKSAPPVVHVMMSNVYLFVPPMLNPIIYSVKTKEIRKGILKFFHKSQA |
| 2YYE Chain:A ((3-345)) | GGIMVELLKLVRSSGCAAKVGPGDLQEILKGFNIYTDESTLVSIGDDAGVYEHNGIIWVYTVDIITPVVNDPYLWGAISTANALSDVYAMGGIPVNALAISCFNNCELDIEIFREVIRGALDKLREAKTVLLGGHTIDDKEPKFGLSVAGICPEGKYITQSGAQVGQLLILTKPIGTGILIKGLKEGILKEEDINEAIENMLALNDKARNLMLSLDATACTDVTGFGLLGHAWNICKNSNIGARIFFEKVPYYQLSENLVKKKIYPKGAIENLNFVKNYLKSNLDNWKLILLSDPVTSGGLLFTINKEKLEKIDETAKELEVNYWIIGETIAENVLEVL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YYE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -314997 for 2629 contacts (-119.8/contact) +
2D Compatibility (PS) -31297 + (NN) 7069 + (LL) 300
1D Compatibility (HY) -800 + (ID) 1550
Total energy: -341275.0 ( -129.81 by residue)
QMean score : 0.095
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