Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------MLGPAYNHTMETPASFLLVGIPG--LQSSHLWLAISLSAM--------------YITALLGNTLIVTAIWMDSTRHEP-------MYCFLCVLAAV-----DIVMASSVVPKMVSIF-------CSGDSSISFSACFTQMFFVHLATAVETGLLLTMAFDRYVAICKP---LHYKRILTPQVMLGMSM-AVTIRAVTFMTPLSWMMNHLPFCGSNVVVHSYCKHIA----LAR----LACADPVP----SSLYSLI--GSSLMVGSDVAFIAA---SYILILRAVFDLSSKTAQLKALSTCG------SHVGVMALYYL------------------PGMASIYAAWLGQDIVPLHTQVLLA--DLYVIIPATLNPI------IYGMRTKQLLEGIWSYLMHFLFDHSNLGS--- |
| 2IQH Chain:A ((21-489)) | NATEIRASVGKMIDGIGRFYIQMCTELKLSDYEGRLIQNSLTIERMVLSAFDTGGPIYRRVDGKWRRELILYDKEEIRRIWRQANNGDDATAGLTHMMIWHSNLNDATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTMVMELIRMIKRGINRRTRIAYERMCNILKGKFQTAAQRTMVDQVRESRNPGNAEFEDLIFLARSALILRGSVAHKSCLPACVYGSAVASGYDFEREGYSLVGIDPFRLLQNSQVYSLIRPNENPAHKSQLVWMACHSAAFEDLRVSSFIRGTKVVPRGKLSTRGVQIASNENMETMESSTLELRSRYWAIRTRSGGNTSSGQISIQPTFSVQRNLPFDRPTIMAASDMRTEIIRLMESARPEDVSFQGRGVFELSDEKATSPIVPSFDMSNEGSYFF |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IQH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -231351 for 2142 contacts (-108.0/contact) +
2D Compatibility (PS) -33050 + (NN) 5030 + (LL) 0
1D Compatibility (HY) -2800 + (ID) 3250
Total energy: -265421.0 ( -123.91 by residue)
QMean score : 0.033
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