Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------------------------------------------------------------------------------------------------MNHMSASLKISNSSKFQVSEFI-------------LLGFPGIHSWQHWLSLPLALLYLSALAANTLILIIIWQN--PSLQQPMYIFLGILCMVDMGLATTIIPKILAIFWFDAKVISLPECFAQIYAIHFFVGMESGILLCMAFDRYVAICHPLRYPSIVTSSLILKATLFMVLRNGLFVTPVPVLAAQRDYCSKNEIEHCLCSNLGVTSLACDDRRPNSICQLVLAWLGMGSDLSLIILSYILILYSVLRLNSAEAAAKALSTCSSHLTLILFFYTIVVVISVTHLTEMKATLIPVLLNVLHNIIPPS---LNPTVYALQTKELRAAFQKVLFALTKEIRS------------------------------ |
| 4K70 Chain:A ((2-483)) | PGSMEALVRALEEADHAVATVVQSRILEFFMAAGRETPAGVRGLWARALRLACRAYVETGTCEAAVLAENLAGLALWRLRHDWDEGTAPLLELLGVVNGDDTTAALTEAGLRTSAEFGPDAMFRLVSEWCAAFDEALAGARSADDVLAAPRVVPPEQTARALVQPRFATLYDMDFVQDGLRYVAQHTNWALPLALAVRQMQNEGLKPLTRALFALTIADEFFHDRQNPTLREQFAEAARAVD-EAALVPVGEVNATPRTAVEVRVSAALAHGDAYVRELR-PGTVARRLRTDQGVLALLDPGAQAVHVAAAA---------DLDHT---QVDATGVWEAVQASASPLQVVEALVTAGFTRRHCDLLERAVLDRAPRLTDAQRAVGCTAVVGGVVHRLLDDYGPGLDY-VRAYTDVADTLEPLYGDVTAALGLPEKGVEHVVRHCMAPRPPTEHVGAARAALLREVAAAERRAGLAHSAAREALNTWLAFRAQSRWGL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4K70.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -360988 for 2502 contacts (-144.3/contact) +
2D Compatibility (PS) -31496 + (NN) -6967 + (LL) 836
1D Compatibility (HY) 2800 + (ID) 2500
Total energy: -398315.0 ( -159.20 by residue)
QMean score : 0.239
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