Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------MERDKPVSVSEFLLLGLSRQPQQQHL-----LFVFFLSMYLA------TVLGNLLIILAISIDSRLH------TPMYFFLSNMSFVDNCFS--------------TTVPKMLANHILRTQTISFSGCLMQMY--FISELADMDNFLLAVMAYDRFVAVCRPLHYTAKMIHQLCALLVTGSWVVANSNALLHTLLMARLSFCADNTI-PHIFCDVTPLLKLSCSDTHLSEVMI----LTEAALVTITPFLCLLASYMHITCVVLRVPSTKGRWKAFSTCGS----HLAVVLLFYGTIMSPYFRTSSSHSAQRDIAAAVR---------------FTVVTPVMNPLIYSLRNKDIKGALVKVVAVKFFSVQ |
| 4L8T Chain:A ((64-447)) | EYLGMLQYKREDEAKLIQNLILDLKPRGVVVNMIPGLPAHILFMCVRYADSLNDANMLKSLMNSTINGIKQVVKEHLEDFEMLSFWLSNTCHFLNCLKQYSGEEEFMKHNSPQQNKNCLNNFDLSEYRQILSDVAIRIYHQFIIIMEKNIQPIIVPGMLEYESLQGYTMTSVLQQLSYFYTTMCQNGLDPELVRQAVKQLFFLIGAVTLNSLFLRKDMCSCRKGMQIRCNISYLEEWLKDKNLQNSLAKETLEPLSQAAWLLQ------VKKTTDSDAKEIYERCTSLSAVQIIKILNSYTPIDD--FEKRVTPSFVRKVQALLNSREDSSQLMLDTKYLFQVTFP-FTPSPHALEMIQIPSSF----KLGFLNRL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4L8T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -248286 for 2142 contacts (-115.9/contact) +
2D Compatibility (PS) -30462 + (NN) -8947 + (LL) 1524
1D Compatibility (HY) -12400 + (ID) 2300
Total energy: -300871.0 ( -140.46 by residue)
QMean score : 0.252
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