Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFLTERNTTSEATFTLL--GFSDYLELQIPLFFVFLAVYGFSVVGNLGMIVIIKINPKLHTPMYFFLNHLSFVDFCYSSIIAPMMLVNLVVEDRTISFSGCLVQFFFFCTFVVTELILFAVMAYDHFVAICNPLLYTVAISQKLCAMLVVVLYAWGVACSLTLACSALKLSFHGFNTINHFFCELSSLISLSYPDSYLSQLLLFTVATFNEISTLLIILTSYAFIIVTTLKMPSASGHRKVFSTCASHLTAITIFHGTILFLYCVPNSKNSRHTVKVASVFYTVVIPLLNPLIYSLRNKDVKDAIRKIINTKYFHIKHRHWYPFNFVIEQ |
| 2CVH Chain:A ((1-220)) | ----MLSTGTKSLDSLLGGGFAPG---------VLTQVYGPYASG--------KTTLALQTGLLSG-KKVAYVD--TEGGFSPERLVQMA-ETRGLNPEEALSRFILF-TPSDFKEQRRVIGSLKKTV-------------DSNFALVVVD-------------------------SITAHYRAEENRSGLIAELSRQLQVLLWIARKHN-----------IPVIVINQVHFDSRTEMTKPVAE-----QTLGYRCKDILRLDKLPKPG-----LRVAVLERHRFRPEGLMAYFRITERGIEDVE------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CVH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -254876 for 1800 contacts (-141.6/contact) +
2D Compatibility (PS) -22468 + (NN) 3161 + (LL) 10328
1D Compatibility (HY) -3600 + (ID) 2300
Total energy: -269755.0 ( -149.86 by residue)
QMean score : 0.210
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