Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFLYLCFIFQRTCSEEMEEENATLLTEFVLTGFLHQPDCKIPLFLAFLVIYLITIMGNLGLIVLI-WKDPHLHIPMYLFLGSLAFVDASLSSTVTPKMLINFLAKSKMISL---SECMVQFF--SLVTTVTTE-CFLLATMAYDRYVAIC-------KALLYPVIMTNELCIQLLVLSFIGGLLHALIH-EAFSFRLTFC------------NSNIIQHFYCDIIPLLKISCTDSSINF--------------------------------------LMVF-----------IFAGSVQVFTIGTILISYTIILFTILEKKSIKGIRKAVST---------CGAHLLSVSLYYGPLT-------FKYLGSASPQADDQDMMESLFYTVIVPLLNPMIYSLRNKQVIASFTKMFKSNV------------------------------------------------------------------------- |
| 4NNB Chain:A ((4-527)) | TSLYITAAPIGAVPKFLDPFEATFIPSFLLEGFFDAD--RCASIAADLKTDGWEVVPAGGRLLQVGHAQPIAHFP----KPWLAALSNKLARRIVLQLTTYGWIVSEQGDLLWEHERQHHYLPPALIEAIEKESPALLKNMEEAGWIACAAGYWQAGKARSPYLPITPEAITEETIRSMRAGAAVVHLHTRDLSDRRRIEIPGLGVVTVGSQRNQIVLDDYDAIVPMVKKREPAAILNLSTSVRGDRHGARSKLRRAHLKFYDDVGSAPEVASLSPAAVVFQGGGGYDNAPDFLDAQFDHFERVGTRPEVEVFNHAIVDNATSLYRDRLLRTGKPVLFMLVAGVDQYRRDPITGEVEDDSLIARVVREEISSLLADESADSHRRAVELAIGQLRPVVERLRASFPVSKISILLPGPMQNLLVDVALGLGLDGIRVGLEDGLTVNDARVPGGVRKARGTWEQVSLVREELLGRGATILTAAQVRDMFGLGI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NNB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -241623 for 1985 contacts (-121.7/contact) +
2D Compatibility (PS) -32755 + (NN) 5348 + (LL) 588
1D Compatibility (HY) -3600 + (ID) 2750
Total energy: -274792.0 ( -138.43 by residue)
QMean score : 0.187
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