Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | --MAAENSSFVTQFILAGLTDQPGVQIPLFFLFLGFYVVTVVGNLGLITLIRLNSHLHTPMYFFLYNLSFIDFCYSSVITPKMLMSFVLKKNSISYAGCMTQLFFFLFFVVSESFILSAMAYDRYVAICNPLLYMVTMSPQVCFLLLLGVYGMGFAGAMAHTACMMGVT----------------FCANNLVNHYMCDILPLLECACTSTYVNELVV------FVVVGIDIGVPTVTIFI----SYALILSSIFHIDSTEGRSKAFSTCSSHI----------IAVSLFFGSGAFMYLKPF-----------SLLAMNQGKVSSLFYT---TVVPMLNPLIYSLRNKDVKVALKKILNKNAFS-------------------------------------------------------------------------------------------------------------------------- |
3ODU Chain:A ((37-502)) | PCFREENANF--------------NKIFLPTIYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFVITL--PFWAVDAVANWYFGNFLCKAVHVIYTVNLYSSVWILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIFANVSEADDRYICDRFYPNDLWVVVFQFQHIMVGLILPGIVILSCYCIIISKLSHSGSNIFEMLRIDEGL-RLKIYKDTEGYYTIGIGHLLT--KSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYGSKGHQKRKALKTTVILILAFFACWLPYYIGISIDSFILLEIIKQGCEFENTVHKWISITEALAFFHCCLNPILYAFLGAKFKTSAQHALTSGRPLEVLFQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ODU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -235595 for 1916 contacts (-123.0/contact) +
2D Compatibility (PS) -28914 + (NN) 1812 + (LL) 708
1D Compatibility (HY) -16000 + (ID) 2250
Total energy: -280239.0 ( -146.26 by residue)
QMean score : 0.183
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