Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRYTGGDKREKQCFSSVDSNYNHTIKRQNFEIMKTIGTLIQEGSKLLSSHKVESPYLDCEIIMQHVLDVERSFIIMNYADQVSIKKEQLFWKLTKKRAERYPISQIIGNREFWSKNFIVNRHVLDPRADSEILVSAALKYYPNKKQEMEIADFGTGTGCLLISVLSEYEHAVGVGFEKSLKAYKVACQNMEKHNLLGRAKMFPSSWTEC----KGLFDLIISNPPYIRRDKLKDLQAEVQKEPKIALDGGIDGLSCYLSIFPIL--KRCLKKNGFAILEIGEDQNDIDKIVPSYELAFQEYMYDLAGMKRCIVIKRT |
2ESR Chain:A ((18-142)) | ------------------------------------------------------------------------------------------------------------------------------------VRGAIFNMIGPYFNGGRVLDLFAGSGGLAIEAVSRGM-SAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDPPYAKET--------------------------IVATIEALAAKNLLSEQVMVVCETDKTVLLPKEIATLGIWKEKIYGISKVTVYVNEGHHHH |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ESR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -56672 for 880 contacts (-64.4/contact) +
2D Compatibility (PS) -12873 + (NN) -4932 + (LL) 11308
1D Compatibility (HY) -4000 + (ID) 1250
Total energy: -68419.0 ( -77.75 by residue)
QMean score : 0.401
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