Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMTIKVGIIGCGGIANGKHMPSLQKV-ENVEMIAFCDVDISKAASAAEAYGTDNAKVYDDYKALLKDDTIDVIHVCTPNDSHCEITVAGLHAGKHVMCEKPMAKTTAEAQKMIDTAKSTGKKLTIGYQNRFRPDSQFLHQAAQRGDLGDIYFGKAHAIRRRAVP---TWGVFLNEEAQGGGPLIDIGTHALDLTLWMMDNYEPESVMGSTFHKLNKQHDAANAWGSWNPDEFTVEDSAFGFIKMKNGATIILESAWAINSLEVDEAKCSLSGTKAGADMKDG----LRIHGEDMGTLYTKHVELENKGVDFYEGNEVDEAEEEAKAWIDAVVNDTEPVVKPEQAMVVTKILEAIYQSAKSGKAIYFE |
| 3Q2I Chain:A ((11-351)) | DRKIRFALVGCGRIAN-NHFGALEKHADRAELIDVCDIDPAALKAAVERTGAR---GHASLTDMLAQTDADIVILTTPSGLHPTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAADKAKKHLFVVKQNRRNATLQLLKRAMQEKRFGRIYMVNVNVFWTRPQEYYDAAGWRGTW-EFDGGAFMNQASHYVDLLDWLIGP--VESVQAYTATLA---------------RNIEVEDTGTVSVKWRSGALGSMNVTMLTYPK-NLEGSITILGEKGSVRVGGVAVNEIQHWEFSEPHAMDE--EIKDAS--------GFGHPLYYDNVIKTMRGEATPETDGREGLKSLELLIAMYLSARDGRRVSLP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3Q2I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -111574 for 2807 contacts (-39.7/contact) +
2D Compatibility (PS) -34970 + (NN) -11003 + (LL) 1208
1D Compatibility (HY) -9200 + (ID) 3850
Total energy: -169389.0 ( -60.35 by residue)
QMean score : 0.435
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