Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTGWISIDRSIQNHWLFKEKRTFSKFEAWIYLLMEANHSKAKVPIGNQIVTVERGQRLTSILTLSDLFNWSRFKVKTFLDLLESDGMLEVKTTSKYTLITIVNYDFYQSEQGRNQHQNDIKPTSKQHQSNINPTSKQHQTNTNNNDNKDNNEKNVNNEKKKTTAFDFFQDNGFGFITSYNLDDLNYYLDSFENDSDEIVTASLKIAKDRNKVTWGYAKSILNTWLNANLKSIEQVRAFEKQQLESKKQNYKPFVKQSKEKTPKWLTDSTRETKTPEVDENLEKDREAFIKRLNSKWE |
1E2X Chain:A ((10-231)) | -------------------QSPAGFAEEYIIESIWNN-------------RFPPGTILPAERELSELIGVTRTTLREVLQRLARDGWLTIQHGKPTKV------------------------NNFWETSGLNILETLARLDHESVPQLIDNLLSVRTNISTIFIRTAFRQH------PDKAQEVLATANEVADHADAFAELDYNIFRGLAFASGNPIYGLILNGMKGLYTRIGRHYFANPEARSLALGFYHKLSALCSEGAHDQVYETVRRYGHESGEIWHRMQ------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1E2X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 57471 for 1679 contacts (34.2/contact) +
2D Compatibility (PS) -23437 + (NN) -4977 + (LL) 4996
1D Compatibility (HY) -2400 + (ID) 1250
Total energy: 30403.0 ( 18.11 by residue)
QMean score : 0.244
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