Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKILSYLKKFYLFLLIGAIMQANESMGAKLPKTDERVIYLAGGCFWGLEAYMERI--YGVIDASSGYANGKTSSTNYEKL--HESDHAESVKVIYDPKKISLDKLLRYYFKVIDPVSVNKQGNDVGRQYRTGIYYVNSADKEVIDNALKALQKEVKGKIAIEVEPLKNYVRAEEYHQDYLKKHPGGYCHIDLKKADEVIVDDDKYTKPSDEVLKKKLTKLQYEVTQNKHTEKPFENEYYNKEEEGIYVDITTGEPLFSSADKYDSGCGWPSFSKPINKDVVKYEDDESLNRKRIEVLSRIGKAHLGHVFNDGPKELGGLRYCINSAALRFIPLKDMEKEGYGEFIPYIKKGELKKYIQDKKSH |
3PIM Chain:A ((6-179)) | ------------------------SKTIKYDPAKDKLITLACGCFWGTEHMYRKYLNDRIVDCKVGYANGEES---YKRVCGGDTDFAEVLQVSYNPKVITLRELTDFFFRIHDPTTSNS-----GTQYRSGLFAHSDADLKELAKIKEEWQPKWGNKIATVIEPIKNFYDAEEYHQLYLDKNPQGYACPTHYLREM---------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PIM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -57814 for 1198 contacts (-48.3/contact) +
2D Compatibility (PS) -16737 + (NN) -7881 + (LL) 11520
1D Compatibility (HY) -9200 + (ID) 3000
Total energy: -83112.0 ( -69.38 by residue)
QMean score : 0.514
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