Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKGILNVLLVFALIAGLSVPSSMQVEAAAPTIKVHFIDV-GQGDAIYIKAPS-GEDILIDAGNKGKGKTVVNYLKKLKVKDIEIMIASHSDADNIGGLPEVMNNIKVKNLYAPKSTNTTAAYKNFVNTAKKKKLTIKTAKAGVKLPVKGVNAQFVGPV-KTYGKTDRNNWSAVLHVAYKKNTFLFTGDAQTKAENDMIKAKKTLRADVLKVSTQGSKAATSKAFVNVVKPKYAIISVGKNGYGHPTSQTVNTLKKAKAKVYRTDRNKTVVVTGNGSSYSIGK |
| 1XM8 Chain:A ((1-135)) | --------------------------------MQIELVPCLKDNYAYILHDEDTGTVGVVDPSEA---EPIIDSLKRSG-RNLTYILNTHHHYDHTGGNLELKDRYGA-KVIGSAMDKD--RIP----------GIDMALKDGDKWMFAGHEVHVMDTPGHT-------KGHISLYFP--GSRAIFTGDTMFS------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XM8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -70464 for 1072 contacts (-65.7/contact) +
2D Compatibility (PS) -14184 + (NN) -2382 + (LL) 9024
1D Compatibility (HY) -6000 + (ID) 1000
Total energy: -85006.0 ( -79.30 by residue)
QMean score : 0.581
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