Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKVQRIQAIENLIHEKGS--ISLDDLC---------EQFNVSKNTVRRDIAKLLQKNTIQKVYGGVVSVYNNPEEIRPFENRDTENHL----EKQLIGKAAADFIEENDLIFIDSGTTTSCLAAALPTDKE---ITIITNSLDVINFASEMDNVKLIVIGSTFKPSTKSFVGVENWGFF----------EKYNITKAFMAATALSTAHGVMNSDILEYEIKRHMMEKATAKFLLVDHTKVDKSALLTYGELAEFDWLVTSKDIAGGCLGYCEDVGVLVRLV |
1T43 Chain:A ((2-275)) | EYQHWLREAISQLQASESPRRDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLPLFVSPATLIPRPDTECLVEQALARLPEQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAGYHDVETCRDYGD------NERVTLGRY- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1T43.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -36981 for 1896 contacts (-19.5/contact) +
2D Compatibility (PS) -26143 + (NN) -4090 + (LL) 228
1D Compatibility (HY) -400 + (ID) 1600
Total energy: -68986.0 ( -36.39 by residue)
QMean score : 0.222
|
|
|