Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---MAAILQIIGFKNSGKTTLLNALIRASRKENYTVSAIKHDAHDFSVDHAGTDSYSFQESGAEAVVIANSRQYAVMEQTGIDLKTAIQKLPESDIVLIEGYKEGPFPKIILVREQAEIELLKNSKA------VHKIATH------------NPALKKEAIFIGEENALNLFAETLIKEFLK
1D1Q Chain:A ((3-161))
IEKPKISVAFIALGNFCRSPMAEAIFKHEVEKA------NLENRFNKIDSFGTSNYHVGES-------PDHRTVSICKQHGVKINHKGKQIKTKHFDE--------YDYIIGMDESNINNLKKIQP-EGSKAKVCLFGDWNTNDGTVQTIIEDPWYGDIQDFEYNFKQITYFSKQFLKKEL-
General information:
TITO was launched using:
RESULT:
Template:
1D1Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37191 for 1135 contacts (-32.8/contact) +
2D Compatibility (PS) -15014 + (NN) -6704 + (LL) 1756
1D Compatibility (HY) -7600 + (ID) 1150
Total energy: -65903.0 ( -58.06 by residue)
QMean score : 0.368
(partial model without unconserved sides chains):
PDB file :
Tito_1D1Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1D1Q-query.scw
PDB file :
Tito_Scwrl_1D1Q.pdb
: