Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNVTSYKEMLAKPWGKIQYEITFAQLSHIKNQNVLDFGAGFCLTAQHLAKE-NNVTAIEPNPKLLYDNQSD-----NIYK-ILGSYEALRDLPNQSFDTIICHNVLEYIDKHNHPAYFDEFSRLLKPNGELSLIKHNITGKILQSVIFSNDTSTAMELLTGEANFKSASFDQGNIYTLEELKQNT---NLLVERYQGIRTFYSLQPNHFKTETGWLNKMLAIELSVADKAPYKDIAFLQHITLKKSL |
| 2YQZ Chain:A ((39-196)) | ------------------------------EEPVFLELGVGTGRIALPLIARGYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIP-LPDESVHGVIVVHLWHLVP--DWPKVLAEAIRVLKPGGALLEGWDQAEASPEWTL-QE-RWRAFA---AEEGFP---VERGLHAKRLKEVEEALRRLGLKPRTREVARWREERTPREALEALSERLYSFTQGLPEPVHARVMERLWAWAEAELGDL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YQZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -57179 for 986 contacts (-58.0/contact) +
2D Compatibility (PS) -15396 + (NN) 1139 + (LL) 3516
1D Compatibility (HY) -2400 + (ID) 1200
Total energy: -71520.0 ( -72.54 by residue)
QMean score : 0.382
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