Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEKVIIFDMDGVIVDSEYTFLDNKTEMLREEGIDTDVSYQYQYMGTTFEFMWQAMKE-EFGLPKTVKEYIAEMNRRRQAIVAR--DGVRPIKGAQRLIHWLHQHGYRLAVASSSPMVDIKRNLKELGVTECF--EYMVTGEDVSSSKPAPDVFLRAAELLDVDPKVCIVIEDTRNGSLAAKAAGMYCFGFANPDYPPQD--LSMADKVISDYQDIYIYLPE
3QXG Chain:A ((23-239))
KLKAVLFDMDGVLFNSMPYHSEAWHQVMKTHGLDLSREEAYMHEGRTGASTINIVFQRELGKEATQEEIESIYHE-KSIL-FNSYPEAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEHN-FPGMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLFPSMQTLCDSWDT
General information:
TITO was launched using:
RESULT:
Template:
3QXG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -119819 for 1832 contacts (-65.4/contact) +
2D Compatibility (PS) -23330 + (NN) -15559 + (LL) 120
1D Compatibility (HY) -7600 + (ID) 2350
Total energy: -168538.0 ( -92.00 by residue)
QMean score : 0.553
(partial model without unconserved sides chains):
PDB file :
Tito_3QXG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QXG-query.scw
PDB file :
Tito_Scwrl_3QXG.pdb
: