Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKILILDDEMFARQELSFLVEHSQEVDNPEIFQAEDISEAEKILFRQQIDLIFLDISLSEENGFTLANQLSQL--AHPPLVVFATAYDNY--AVKAFESNAVDYIMKPFEQQRVDMALSKVKKLSQLTTASDVEQAIPKKASVELLTLTLSDRSVVVKMQDIVAASVEDGELTVSTVQKTYTIRKTLNWFKSRAVAPYFLQIHRNTVINLEMIEEIQPWFNHTLLLIMSNGEKFPVGRSYLKDLNEHLTM
2ZAY Chain:A ((10-128))
-RIMLVDTQLPALAASISALSQE-GF---DIIQCGNAIEAVPVAVKTHPHLIITEANMPKISGMDLFNSLKKNPQTASIPVIALSGRATAKEEAQLLDMGFIDFIAKPVNAIRLSARIKRVLKLLY----------------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2ZAY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -89362 for 884 contacts (-101.1/contact) +
2D Compatibility (PS) -12621 + (NN) -10540 + (LL) 10512
1D Compatibility (HY) -4800 + (ID) 1100
Total energy: -107911.0 ( -122.07 by residue)
QMean score : 0.539
(partial model without unconserved sides chains):
PDB file :
Tito_2ZAY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZAY-query.scw
PDB file :
Tito_Scwrl_2ZAY.pdb
: