Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MCKYKAIIFDMDGVLFDTEL-FYYKRRERFLKQHGITIDHLPMNFFIGGNMKQVWKSVL----------GDQY---DTWDIDKLQQDYSRYKEDNPLPYKDLIFQDCKRVIEKLHHKGYLLGLASSSTRHDIMLALESFNLDTY-FKVILSGEEFSESKPNPAIYNRAAELLDIPK-QQILIVEDSEKGITAGIAAGIDVWAIEDK-YFG----M---------------------NQSQANVLVSDLSQFFVKLDNY |
| 1SWV Chain:A ((5-258)) | --KIEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAITAEEARKPMGLLKIDHVRALTEMPRIASEWNRVFRQLPTEADIQEMYEEFEEILFAI-LPRYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFTIETMQELESVMEHI |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SWV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -91302 for 1828 contacts (-49.9/contact) +
2D Compatibility (PS) -23274 + (NN) -11741 + (LL) 124
1D Compatibility (HY) -7600 + (ID) 1650
Total energy: -135443.0 ( -74.09 by residue)
QMean score : 0.540
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