Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -------------MVTVILAEKETQAAAYAESLGPASKKGKVHIIKHTPYFSDEVH---------VIAAEGHLFEYGLPKDN--WD-LDKLPLVDVSFKQTLKQDKVSKEIFKQIYQEVTAADQVIIGTDSDREGERIAYSILSHIPEGKNK-VTKRLWVNSLTTRALQKAFQNLREPIETYNYYLEAEARAQSDWLVGMNLSPLVTLELQKRGRLPKG-KGNSLSVGRVQTPGVRLICENDLAIQNFRPETYWKLQLQDK----ETEISFSNKEKYSDSELILAQARQLK-AISIVSSVEMEEKQRAAPHLFNLSDIQGLAAKQWGFEPTKTERLIESLYLKKYLSYPRTDTRFITEEEFDYLKNYLKSYQEVINCSFEAVNLEPRENYVNPEKVAKT--SHYALIPTENIPNLVTLKPDERLIYEAVVRRTLLMFAADCRYSTTTVEVENQGLVFKTTGRQMFDPGWAAFSQQKLKGDIELPDYRVGDQIE-TKVIIVEGMTKPPKRITESQLISDILPKYGLGTQATRATMLQTIQDRGYITKDKKTGQLFPTNKAYLLIHYL--YDNEFASPETTGGWELFLSQIGEGEINPREFVDAIKEKLAAQIAVVKERSD-------------- |
4CGY Chain:A ((22-640)) | FSRAAMEMALRGVRKVLCVAEKNDAAKGIADLLSNGRMRRREGLSKFNKIYEFDYHLYGQNVTMVMTSVSGHLLAHDFQMQFRKWQSCNPLVLFEAEIEKYCPENFV--DIKKTLERETRQCQALVIWTDCDREGENIGFEIIHVCKAVKPNLQVLRARFSEITPHAVRTACENLTEP--DQRVSDAVDVRQELDLRIGAAFTRFQTLRLQRI--FPEVLAEQLISYGSCQFPTLGFVVERFKAIQAFVPEIFHRIKVTHDHKDGIVEFNWKRHRLFNHTACLVLYQLCVEDPMATVVEVRSKPKSKWRPQALDTVELEKLASRKLRINAKETMRIAEKLYTQGYISYPRTETNIFPRDLN--LTVLVEQQTPDPRWGAFAQSILERGGP-TPRNGNKSDQAHPPIHPTKYTNNL---QGDEQRLYEFIVRHFLACCSQDAQGQETTVEIDIAQERFVAHGLMILARNYLDVYPYDHWSDKILPVYEQGSHFQPSTVEMVDGETSPPKLLTEADLIA-LMEKHGIGTDATHAEHIETIKARMYVGLTPDK-RFLPGHLGMGLVEGYDSMGYEMSKPDLRAELEADLKLICDGKKDKFVVLRQQVQKYKQVFIEAVAKAKKLDEALAQYFGNGT |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CGY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -149151 for 4606 contacts (-32.4/contact) +
2D Compatibility (PS) -61158 + (NN) -16061 + (LL) 652
1D Compatibility (HY) -28800 + (ID) 6750
Total energy: -261268.0 ( -56.72 by residue)
QMean score : 0.441
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