Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNIKRHSIFLWLTTSILAILMAVGMTIYFNTYQASPLARRIAKTATNHKNYLLFRSKGKVKANIIFYQGALVEEEAYSQLARDLADKGYNTYILKTPLNLPVLS--------------PHKAKTIINQNHLTNVYLAGHSLGGVVASQNAK--VAPVRGLILLASYPSR--------------------------------------------K-------------------------------SDLSHKKLRVLSITASNDHILNWEKYEEAKKRLPNSSTFRTIVGGNHSRFGNYGHQKGDGKATLSHKSSEKQLATFISNFIH |
| 3QVM Chain:A ((26-276)) | ----------------------------------------------------------GGEKTVLLAHGFGCDQNMWRFMLPELEK-QFTVIVFDYVGSGQSDLESFSTKRYSSLEGYAKDVEEILVALDLVNVSIIGHSVSSIIAGIASTHVGDRISDITMICPSPCFMNFPPDYVGGFERDDLEELINLMDKNYIGWANYLAPLVMGASHSSELIGELSGSFCTTDPIVAKTFAKATFFSDYRSLLEDISTPALIFQSAKDSLASPEVGQYMAENIP-NSQLELIQAEGHCLH----------------MTDAGLITPLLIHFIQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QVM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -61461 for 1300 contacts (-47.3/contact) +
2D Compatibility (PS) -17049 + (NN) -5996 + (LL) 5136
1D Compatibility (HY) -6800 + (ID) 1100
Total energy: -87270.0 ( -67.13 by residue)
QMean score : 0.455
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