Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKYIVNTSNDPAYNVALEAYAFQKLT--DIDEIFILWINEPAIIIGRHQNTIQ-EINKEFIDKNGIHVVRRLSGGGAVYHDLNNL-NYTIISNNTQEGAFDFQTFSKPVIDTLAKLGVKAEFT-GRNDLEINGQKFAGNAQAYYKGRMMHHGCLLFDVDMSVLGQALKVSKDKIESKGIKSVRARVTNIVDHLSDKITVQEFSDAILAQMKEEYPEMDEYVLSDAELSEIQAMRDNQFATWDWTYGKAPEYTIERGVRYPAGKITTYANVENSTIKSVKIFGDFFGVKPVDDIEKMLEGVRYDYKDVLAALKTVDTSQYFSRMTPEEITKAIVD |
| 2QHS Chain:A ((23-228)) | FLVEDLGLVPYGEAWAYQKRVHREVVAGNRPPTLLLLEHPRVITLGRKATGENLLFPESWYRENGFELYWVERGGDVTYHGPGQLVGYPIFPVGR-EVRRFLRQIEEAIVRVAAGYGISAYPTPGYAGVWVGEDKLCAIGVAVKEGVSFHGFALNVNTDLNDFTVIV-PC--GLK-------GKGVTSLEKLLGRKVPMEEAKARVVAAFAEVFGLRPV------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QHS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -77085 for 1629 contacts (-47.3/contact) +
2D Compatibility (PS) -21468 + (NN) -5772 + (LL) 8572
1D Compatibility (HY) -8800 + (ID) 1650
Total energy: -106203.0 ( -65.20 by residue)
QMean score : 0.450
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