Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | --MRIIVPATSANIGPGFDSIGVALSKYLSIEVLEESTE--WLVEHNLVNIPKD-HTNLLIQTALHVKSDLAPH---RLKMFSDIPLARGLGSSSSVIVAGIELANQLGNLALSQKEKLEIATRLE------GHPDNVAPAIFGDLVISSIVKNDIKSLEVMFPDSSFIAFIPNYELKTSDSRNVLPQKLSYEDAVASSSVANVMVASLLKGDLVTAGWAIERDLFHERYRQPLVKEFGVIKQISTQNGAYATYLSGAGPTVMVLCSKEKEQPIVTELSKLCLDGQIQVLNIERKGVRVEKR |
1FWK Chain:A ((1-296)) | MKVRVKAPCTSANLGVGFDVFGLCLKEPYDVIEVEAIDDKEIIIEVDDKNIPTDPDKNVAGIVAKKMIDDFNIGKGVKITIKKGVKAGSGLGSSAASSAGTAYAINELFKLNLDKLKLVDYASYGELASSGAKHADNVAPAIFGGFTMVTNYEPLEVLHIPIDFKLDILIAIPNISINTKEAREILPKAVGLKDLVNNVGKACGMVYALYNKDKSLFGRYMMSDKVIEPVRGKLIPNYFKIKEE-VKDKVYGITISGSGPSIIAFPKEEFIDEVENILRDYYENTIRTEVG---KGVEVV-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FWK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -106316 for 2523 contacts (-42.1/contact) +
2D Compatibility (PS) -30274 + (NN) -5828 + (LL) 544
1D Compatibility (HY) -10800 + (ID) 3700
Total energy: -156374.0 ( -61.98 by residue)
QMean score : 0.407
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