Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDLFLSLERKFKAASDKEVSKQQEAYLRHHFKCYGIKSPERRMLYKELIKAAKRQAKIDWQLLDKCWQSDYREYHHFVLDYLLAMSQFLTYNDCSRLEFYARHQQWWDSIDVLTKIFGNLSLKDDKVMNLLSEWSLDQDFWMRRLAIEHQLGFKE--------KTNTDILSLFILRNTGSQEFFINKAIGWALRDYSKYNKVWVKDFISNHYDELSTLSIREGSKYL--------------------------- |
| 1T06 Chain:A ((1-235)) | MD-FKTVMQELEALGKERTKKIYISN-GAHEPVFGVA--------TGAMKPIAKKIKLNQELAEELYATG--NYDAMYFAGIIADPKAMSESDFDRWIDGA------YFYMLSDYVVAVTLSESNIAQDVADKWIASGDELKMSAGWSCYCWLLGNRKDNAFSESKISDMLEMVKDTIHHSPERTKSAMNNFLNTVAISY-VPLHEKAVEIAKEVGIVEVKRDNKKSSLLNASESIQKELDRGRLGFKRKYVRC |
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General information:
TITO was launched using:
| RESULT:
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Template: 1T06.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -84805 for 1602 contacts (-52.9/contact) +
2D Compatibility (PS) -21019 + (NN) -10294 + (LL) 1916
1D Compatibility (HY) -2000 + (ID) 1100
Total energy: -117302.0 ( -73.22 by residue)
QMean score : 0.472
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